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Zm-PE0075-REFERENCE-TUM-1.0 genome assembly
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European flint genome assemblies

Project description
Resources at MaizeGDB
Downloads
Publications

Project description

Breeding programs in cooler regions of Central Europe exploit heterotic effects between dent and flint lines. To better understand the extent and quality of genomic differences between the flint and dent germplasm pools de novo high-quality sequence assemblies were generated for four flint inbred lines which represent important ancestors of maize hybrid breeding in Central Europe. These include Lacaune (F7, Southern France), Lizargarate (EP1, Northern Spain) and Gelber Badischer Landmais (DK105, Southern Germany), and PE0075, a doubled-haploid line derived from the Petkuser Ferdinand Rot population, a landrace from Northern Germany.


Learn more about this project here: http://www.europeanmaize.net.


Resources at MaizeGDB

Genome Browsers

Assembly pages

Gene models
Records for the EP1 and F7 gene models can be viewed individually at the gene data center.

Downloads

MaizeGDB downloads

GenBank downloads

Publications

Haberer et al. 2020. European maize genomes highlight intraspecies variation in repeat and gene content.
Unterseer et al., 2017. (Preprint) European Flint reference sequences complement the maize pan-genome.